STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_1060KEGG: ccs:CCNA_02726 putative acetyltransferase/acyltransferase. (177 aa)    
Predicted Functional Partners:
Cseg_4057
PFAM: carbonic anhydrase; KEGG: ccs:CCNA_03687 carbonic anhydrase.
  
 
 
 0.733
Cseg_4056
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
 0.699
Cseg_1448
KEGG: mag:amb0864 hypothetical protein.
    
 
 0.678
Cseg_0366
KEGG: ccs:CCNA_00392 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3.
  
    0.504
Cseg_2775
KEGG: ccs:CCNA_02526 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase.
  
  
 0.429
Cseg_1059
PFAM: PhoH family protein; KEGG: ccs:CCNA_02727 PhoH protein.
       0.421
acsA
acetate/CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.407
Cseg_1150
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mei:Msip34_0889 cobalamin synthesis protein P47K.
  
  
 0.401
Cseg_3835
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: ccs:CCNA_00323 low-affinity zinc transport protein.
  
  
 0.401
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.