STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_1067PFAM: NMT1/THI5 like domain protein; KEGG: ccs:CCNA_02716 ABC transporter substrate-binding protein. (333 aa)    
Predicted Functional Partners:
Cseg_1066
ABC transporter related protein; KEGG: ccs:CCNA_02717 maltose/maltodextrin transport ATP-binding protein MalK; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.945
Cseg_2026
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cak:Caul_2657 binding-protein-dependent transport systems inner membrane component.
 
  
 0.707
cysC
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.588
Cseg_2063
Nitrate ABC transporter, inner membrane subunit; KEGG: ccs:CCNA_00646 nitrate transport permease protein NrtB; TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
  
  
 0.572
Cseg_1068
KEGG: ccs:CCNA_02715 MASE1-family sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; MASE1 domain protein; histidine kinase A domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein.
       0.567
ssuB
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
  
 0.546
Cseg_2062
TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; KEGG: ccs:CCNA_00647 nitrate transport ATP-binding protein NrtD; SMART: AAA ATPase.
  
  
 0.546
Cseg_1735
PFAM: Luciferase-like, subgroup; KEGG: pla:Plav_1774 alkanal monooxygenase.
 
  
 0.517
Cseg_0047
Siroheme synthase; KEGG: ccs:CCNA_00024 uroporphyrin-III C-methyltransferase/precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase; TIGRFAM: siroheme synthase; PFAM: Sirohaem synthase, dimerisation domain.
  
  
 0.502
Cseg_2036
KEGG: cak:Caul_2667 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup.
 
  
 0.462
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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