STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_1077TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; KEGG: ccs:CCNA_02701 xanthine dehydrogenase large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead. (777 aa)    
Predicted Functional Partners:
Cseg_1076
KEGG: ccs:CCNA_02702 xanthine dehydrogenase small subunit; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; ferredoxin; CO dehydrogenase flavoprotein domain protein.
 0.999
Cseg_2086
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: vap:Vapar_5490 (2Fe-2S)-binding domain protein.
 
  
  0.993
Cseg_1079
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
 
 0.989
Cseg_1078
KEGG: ccs:CCNA_02700 XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase); TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182.
 
 
 0.977
Cseg_1075
Hydroxyisourate hydrolase; KEGG: ccs:CCNA_02703 urate oxidase; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.953
Cseg_1806
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: cak:Caul_3606 2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
     0.932
Cseg_0048
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: ccs:CCNA_00022 putative aerobic-type carbon monoxide dehydrogenase, small subunit CoxS.
 
     0.931
Cseg_0776
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
 
  
 0.928
Cseg_2923
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: ccs:CCNA_02353 membrane-bound aldehyde dehydrogenase iron-sulfur protein.
 
     0.927
Cseg_2088
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: vap:Vapar_5488 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
  
  
 
0.905
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.