STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_1210KEGG: cak:Caul_3451 peptidase S15; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein. (643 aa)    
Predicted Functional Partners:
Cseg_3540
KEGG: ccs:CCNA_03146 M61 glycyl aminopeptidase; PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein.
  
     0.707
Cseg_0853
PFAM: peptidase M28; KEGG: cak:Caul_0655 peptidase M28.
 
    0.624
purQ
Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]
       0.532
Cseg_1272
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_02232 TonB-dependent receptor.
  
     0.520
Cseg_2427
KEGG: cak:Caul_1858 hypothetical protein.
  
     0.515
Cseg_0570
KEGG: cak:Caul_2996 acid phosphatase.
  
     0.496
Cseg_3421
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2548 TonB-dependent receptor.
  
     0.447
Cseg_3429
KEGG: cak:Caul_4583 thiol-disulfide isomerase.
  
     0.447
Cseg_1212
KEGG: ccs:CCNA_02581 hypothetical protein.
       0.426
Cseg_2098
KEGG: cak:Caul_0622 histidine kinase; PFAM: Two component regulator three Y domain protein; Two component regulator propeller; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
  
     0.423
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.