STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_1267PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: ccs:CCNA_02237 Xaa-Pro dipeptidyl-peptidase. (740 aa)    
Predicted Functional Partners:
Cseg_0962
PFAM: peptidase M28; KEGG: ccs:CCNA_02933 aminopeptidase.
  
    0.656
Cseg_1269
PFAM: lipolytic protein G-D-S-L family; KEGG: ccs:CCNA_02235 putative secreted protein.
 
     0.632
Cseg_1268
PFAM: polysaccharide deacetylase; KEGG: ccs:CCNA_02236 polysaccharide deacetylase family.
       0.574
Cseg_0853
PFAM: peptidase M28; KEGG: cak:Caul_0655 peptidase M28.
  
    0.549
Cseg_1145
PFAM: peptidase M28; KEGG: cak:Caul_3661 peptidase M28.
  
    0.512
Cseg_1483
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pzu:PHZ_c1449 TonB-dependent receptor.
 
     0.505
Cseg_1266
KEGG: ccs:CCNA_02238 hypothetical protein.
       0.493
Cseg_1203
PFAM: peptidase M28; KEGG: ccs:CCNA_02588 aminopeptidase.
  
    0.469
Cseg_2970
PFAM: peptidase M28; KEGG: swi:Swit_0237 peptidase M28.
  
    0.467
Cseg_1520
Nucleotide diphosphatase; KEGG: ccs:CCNA_01336 phosphodiesterase I/nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase.
  
     0.466
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.