STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_1650PFAM: acyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_01412 acyl-CoA dehydrogenase, short-chain specific. (379 aa)    
Predicted Functional Partners:
Cseg_1652
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_01414 3-hydroxyisobutyryl-CoA hydrolase.
 
 0.886
Cseg_3664
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: ccs:CCNA_00763 electron transfer flavoprotein alpha-subunit.
 
 0.848
Cseg_1651
PFAM: Phosphoglycerate mutase; KEGG: ccs:CCNA_01413 phosphoglycerate mutase family protein; Belongs to the phosphoglycerate mutase family.
   
   0.796
Cseg_0771
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: ccs:CCNA_03293 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.795
Cseg_4266
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_00006 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.758
Cseg_3663
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: ccs:CCNA_00764 electron transfer flavoprotein beta-subunit.
 
 
 0.742
Cseg_1964
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_01794 enoyl-CoA hydratase/isomerase family.
  
 0.712
Cseg_2142
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ccs:CCNA_01927 enoyl-CoA hydratase.
  
 0.712
Cseg_1654
TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; KEGG: ccs:CCNA_01416 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; Belongs to the HIBADH-related family.
 
  
 0.677
Cseg_0226
KEGG: cak:Caul_4752 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.674
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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