STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_1743PFAM: monooxygenase FAD-binding; KEGG: pfs:PFLU4110 3-(3-hydroxy-phenyl)propionate hydroxylase, FAD/NAD(P)-binding. (556 aa)    
Predicted Functional Partners:
Cseg_1741
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: avi:Avi_5440 hypothetical protein.
 
   
 0.895
Cseg_1742
5-carboxymethyl-2-hydroxymuconate Delta-isomerase; KEGG: bbt:BBta_5587 putative enzyme with isomerase/decarboxylase activity; PFAM: fumarylacetoacetate (FAA) hydrolase.
  
  
 0.793
Cseg_1740
9-cis-epoxycarotenoid dioxygenase; KEGG: avi:Avi_5950 crocetin dialdehyde; PFAM: Carotenoid oxygenase.
 
   
 0.711
Cseg_1739
KEGG: rha:RHA1_ro02986 benzaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.675
Cseg_1913
PFAM: protein of unknown function DUF35; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: ccs:CCNA_01498 DNA-dependent DNA polymerase III subunit alpha.
   
  
 0.506
Cseg_2341
PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: ccs:CCNA_02477 vanillate demethylase oxidoreductase subunit VanB.
  
   
 0.493
Cseg_1214
PFAM: cytochrome P450; KEGG: ccs:CCNA_02579 cytochrome P450.
  
 
 0.491
Cseg_3016
PFAM: cytochrome P450; KEGG: hne:HNE_2797 cytochrome P450 family protein.
  
 
 0.445
Cseg_1723
PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: avi:Avi_5062 possible oxidoreductase.
  
   0.441
Cseg_1728
PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: avi:Avi_7417 oxidoreductase.
  
   0.414
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.