STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_2035PFAM: Glutathione S-transferase domain; KEGG: cak:Caul_2666 glutathione S-transferase domain-containing protein. (212 aa)    
Predicted Functional Partners:
gshB
TIGRFAM: glutathione synthetase; KEGG: ccs:CCNA_00140 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein; Belongs to the prokaryotic GSH synthase family.
 
  
 0.922
Cseg_2951
Glutathione-disulfide reductase; Maintains high levels of reduced glutathione.
   
 0.917
Cseg_0296
Redoxin domain protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
  
 
 0.912
Cseg_1970
Peroxiredoxin; KEGG: ccs:CCNA_01804 glutathione peroxidase; PFAM: glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 
 0.912
Cseg_0411
TIGRFAM: gamma-glutamyltransferase; KEGG: ccs:CCNA_00565 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase.
    
 0.905
Cseg_2034
KEGG: cak:Caul_2665 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
  
    0.777
Cseg_2033
PFAM: cysteine dioxygenase type I; KEGG: cak:Caul_2664 cysteine dioxygenase type I.
       0.771
Cseg_2032
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2663 TonB-dependent receptor.
       0.768
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.595
Cseg_3248
PFAM: Glutathione S-transferase domain; KEGG: cak:Caul_1177 glutathione S-transferase domain-containing protein.
  
     0.595
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.