STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_23373-phytase; KEGG: ccs:CCNA_01353 3-phytase/6-phytase; PFAM: phytase. (673 aa)    
Predicted Functional Partners:
Cseg_3136
Acid phosphatase; KEGG: ccs:CCNA_00576 oligopeptide-binding protein OppA; PFAM: histidine acid phosphatase.
  
  
  0.913
Cseg_2456
Glucose-1-phosphatase; KEGG: xca:xccb100_3594 phosphoanhydride phosphohydrolase / 4-phytase multifunctional enzyme, probable; PFAM: histidine acid phosphatase.
     
  0.900
Cseg_1826
KEGG: ccs:CCNA_00607 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
 
     0.729
Cseg_0489
KEGG: ccs:CCNA_01189 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain.
 
     0.688
Cseg_3139
KEGG: ccs:CCNA_00573 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
 
     0.658
Cseg_2379
KEGG: cak:Caul_0310 hypothetical protein.
 
    
 0.590
Cseg_2426
KEGG: cak:Caul_1859 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
 
     0.565
Cseg_2050
KEGG: ccs:CCNA_02895 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
 
     0.558
Cseg_2423
KEGG: cak:Caul_1862 TonB-dependent receptor plug; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
 
     0.551
Cseg_3734
KEGG: ccs:CCNA_01021 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
 
     0.546
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.