STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_2454KEGG: cak:Caul_0971 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR. (253 aa)    
Predicted Functional Partners:
Cseg_2453
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ccs:CCNA_00905 hypothetical protein.
       0.767
Cseg_3287
PFAM: FAD dependent oxidoreductase; KEGG: mrd:Mrad2831_2179 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.695
Cseg_3141
KEGG: ccs:CCNA_00571 phosphoenolpyruvate-protein phosphotransferase/phosphocarrier protein HPr/PTS system, glucose-specific IIA subunit; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, glucose subfamily, IIA subunit; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; sugar-specific permease EIIA 1 domain; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region.
 
  
 0.632
Cseg_3738
KEGG: ccs:CCNA_00457 phosphoenolpyruvate-protein phosphotransferase/phosphocarrier protein HPr/PTS system, glucose-specific IIA subunit; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, glucose subfamily, IIA subunit; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; sugar-specific permease EIIA 1 domain; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region.
 
  
 0.632
Cseg_2661
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.604
Cseg_3140
KEGG: cak:Caul_0295 PTS system, N-acetylglucosamine-specific IIBC subunit; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site.
  
  
 0.538
Cseg_3737
KEGG: cak:Caul_0295 PTS system, N-acetylglucosamine-specific IIBC subunit; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site.
  
  
 0.538
Cseg_4081
KEGG: ccs:CCNA_03710 nitrogen regulatory IIA protein; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2.
 
  
 0.528
Cseg_2455
KEGG: xca:xccb100_3595 TonB-dependent outer membrane receptor; TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
       0.508
Cseg_2452
Transcriptional regulator, MarR family; Manually curated; PFAM: regulatory protein MarR; KEGG: cak:Caul_5077 MarR family transcriptional regulator; SMART: regulatory protein MarR.
     
 0.454
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.