Cseg_2560 protein (Caulobacter segnis) - STRING interaction network

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Score

Cseg_2560

RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2. (167 aa)

Predicted Functional Partners:

Cseg_2561

0.942

Cseg_0597

0.797

Cseg_1819

0.793

Cseg_2998

0.792

Cseg_0495

0.790

Cseg_3320

0.786

Cseg_0484

0.783

Cseg_0488

0.783

Cseg_2425

0.775

Cseg_0492

0.772

Your Current Organism:

Caulobacter segnis

NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Cseg_0484	Cseg_2560	PFAM: FecR protein; KEGG: cak:Caul_2649 anti-FecI sigma factor, FecR.	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	0.783
Cseg_0488	Cseg_0492	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: ccs:CCNA_01188 FecR family protein.	PFAM: FecR protein; KEGG: cak:Caul_3281 anti-FecI sigma factor, FecR.	0.473
Cseg_0488	Cseg_2560	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: ccs:CCNA_01188 FecR family protein.	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	0.783
Cseg_0492	Cseg_0488	PFAM: FecR protein; KEGG: cak:Caul_3281 anti-FecI sigma factor, FecR.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: ccs:CCNA_01188 FecR family protein.	0.473
Cseg_0492	Cseg_2560	PFAM: FecR protein; KEGG: cak:Caul_3281 anti-FecI sigma factor, FecR.	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	0.772
Cseg_0495	Cseg_2560	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: ccs:CCNA_01188 FecR family protein.	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	0.790
Cseg_0597	Cseg_2560	PFAM: FecR protein; KEGG: cak:Caul_2727 anti-FecI sigma factor, FecR.	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	0.797
Cseg_1819	Cseg_2560	PFAM: FecR protein; KEGG: cak:Caul_4078 anti-FecI sigma factor, FecR.	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	0.793
Cseg_2425	Cseg_2560	PFAM: FecR protein; KEGG: cak:Caul_1860 anti-FecI sigma factor, FecR.	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	0.775
Cseg_2560	Cseg_0484	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	PFAM: FecR protein; KEGG: cak:Caul_2649 anti-FecI sigma factor, FecR.	0.783
Cseg_2560	Cseg_0488	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: ccs:CCNA_01188 FecR family protein.	0.783
Cseg_2560	Cseg_0492	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	PFAM: FecR protein; KEGG: cak:Caul_3281 anti-FecI sigma factor, FecR.	0.772
Cseg_2560	Cseg_0495	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: ccs:CCNA_01188 FecR family protein.	0.790
Cseg_2560	Cseg_0597	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	PFAM: FecR protein; KEGG: cak:Caul_2727 anti-FecI sigma factor, FecR.	0.797
Cseg_2560	Cseg_1819	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	PFAM: FecR protein; KEGG: cak:Caul_4078 anti-FecI sigma factor, FecR.	0.793
Cseg_2560	Cseg_2425	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	PFAM: FecR protein; KEGG: cak:Caul_1860 anti-FecI sigma factor, FecR.	0.775
Cseg_2560	Cseg_2561	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	PFAM: FecR protein; KEGG: cak:Caul_2244 anti-FecI sigma factor, FecR.	0.942
Cseg_2560	Cseg_2998	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: pzu:PHZ_c2234 transcriptional regulator.	0.792
Cseg_2560	Cseg_3320	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	anti-FecI sigma factor, FecR; PFAM: FecR protein; KEGG: ccs:CCNA_01033 FecR family protein.	0.786
Cseg_2561	Cseg_2560	PFAM: FecR protein; KEGG: cak:Caul_2244 anti-FecI sigma factor, FecR.	RNA polymerase, sigma-24 subunit, ECF subfamily; Manually curated; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: cak:Caul_2245 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2.	0.942

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