STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_2664KEGG: ccs:CCNA_01278 histidine phosphotransferase domain protein. (162 aa)    
Predicted Functional Partners:
Cseg_2662
PFAM: Protein of unknown function DUF2336; KEGG: ccs:CCNA_01280 hypothetical protein.
 
     0.819
Cseg_2826
PFAM: surface presentation of antigens (SPOA) protein; KEGG: cak:Caul_3160 hypothetical protein.
 
  
 0.780
Cseg_1369
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 
 0.777
Cseg_1368
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.773
Cseg_1372
PFAM: Tetratricopeptide TPR_4; KEGG: ccs:CCNA_02137 endoglucanase H.
  
   
 0.771
Cseg_1064
PFAM: Protein of unknown function DUF2336; KEGG: ccs:CCNA_02720 hypothetical protein.
  
     0.767
Cseg_3341
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.765
Cseg_3388
Flagellar hook-associated protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
    0.761
Cseg_1112
PFAM: Flagellar assembly regulator FliX, class II; KEGG: ccs:CCNA_02664 flagellar assembly regulator FliX.
  
     0.755
Cseg_3102
PFAM: Protein of unknown function DUF2336; KEGG: ccs:CCNA_02408 hypothetical protein.
  
     0.747
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.