STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_2675PFAM: cytochrome c class I; KEGG: ccs:CCNA_01268 cytochrome c. (168 aa)    
Predicted Functional Partners:
Cseg_0539
PFAM: cytochrome c1; KEGG: cak:Caul_0703 cytochrome c1.
 
 0.970
Cseg_0537
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.962
Cseg_3428
PFAM: cytochrome c class I; KEGG: ccs:CCNA_03030 cytochrome c.
 
  
 
0.955
Cseg_2109
PFAM: cytochrome c class I; KEGG: cak:Caul_4608 cytochrome c class I.
  
  
 
0.918
Cseg_2508
TIGRFAM: arsenite oxidase, small subunit; KEGG: xau:Xaut_3949 arsenite oxidase small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain.
  
 0.897
Cseg_0538
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.896
Cseg_2676
KEGG: cak:Caul_3077 hypothetical protein.
       0.776
ctaG
Cytochrome c oxidase assembly protein CtaG/Cox11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
  
  
 0.774
Cseg_0284
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 0.731
Cseg_2281
PFAM: cytochrome c oxidase subunit I; KEGG: bpd:BURPS668_1353 cytochrome c oxidase, subunit I.
  
 0.731
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.