Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Cseg_0418 | Cseg_0963 | Cseg_0418 | Cseg_0963 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | PFAM: protein of unknown function DUF1078 domain protein; KEGG: ccs:CCNA_02931 FlgE-related flagellar hook protein. | 0.929 |
| Cseg_0418 | Cseg_1369 | Cseg_0418 | Cseg_1369 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.965 |
| Cseg_0418 | Cseg_2687 | Cseg_0418 | Cseg_2687 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | PFAM: Lytic transglycosylase catalytic; KEGG: ccs:CCNA_01252 soluble lytic murein transglycosylase. | 0.585 |
| Cseg_0418 | Cseg_3529 | Cseg_0418 | Cseg_3529 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | SMART: AAA ATPase; TIGRFAM: ATPase, FliI/YscN family; KEGG: ccs:CCNA_03135 flagellum-specific ATP synthase FliL; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein. | 0.981 |
| Cseg_0418 | fliE | Cseg_0418 | Cseg_3339 | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | KEGG: ccs:CCNA_01006 flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE. | 0.936 |
| Cseg_0963 | Cseg_0418 | Cseg_0963 | Cseg_0418 | PFAM: protein of unknown function DUF1078 domain protein; KEGG: ccs:CCNA_02931 FlgE-related flagellar hook protein. | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.929 |
| Cseg_0963 | Cseg_1369 | Cseg_0963 | Cseg_1369 | PFAM: protein of unknown function DUF1078 domain protein; KEGG: ccs:CCNA_02931 FlgE-related flagellar hook protein. | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.971 |
| Cseg_0963 | Cseg_2687 | Cseg_0963 | Cseg_2687 | PFAM: protein of unknown function DUF1078 domain protein; KEGG: ccs:CCNA_02931 FlgE-related flagellar hook protein. | PFAM: Lytic transglycosylase catalytic; KEGG: ccs:CCNA_01252 soluble lytic murein transglycosylase. | 0.528 |
| Cseg_0963 | Cseg_3529 | Cseg_0963 | Cseg_3529 | PFAM: protein of unknown function DUF1078 domain protein; KEGG: ccs:CCNA_02931 FlgE-related flagellar hook protein. | SMART: AAA ATPase; TIGRFAM: ATPase, FliI/YscN family; KEGG: ccs:CCNA_03135 flagellum-specific ATP synthase FliL; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein. | 0.834 |
| Cseg_0963 | fliE | Cseg_0963 | Cseg_3339 | PFAM: protein of unknown function DUF1078 domain protein; KEGG: ccs:CCNA_02931 FlgE-related flagellar hook protein. | KEGG: ccs:CCNA_01006 flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE. | 0.971 |
| Cseg_1369 | Cseg_0418 | Cseg_1369 | Cseg_0418 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.965 |
| Cseg_1369 | Cseg_0963 | Cseg_1369 | Cseg_0963 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | PFAM: protein of unknown function DUF1078 domain protein; KEGG: ccs:CCNA_02931 FlgE-related flagellar hook protein. | 0.971 |
| Cseg_1369 | Cseg_2687 | Cseg_1369 | Cseg_2687 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | PFAM: Lytic transglycosylase catalytic; KEGG: ccs:CCNA_01252 soluble lytic murein transglycosylase. | 0.514 |
| Cseg_1369 | Cseg_3529 | Cseg_1369 | Cseg_3529 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | SMART: AAA ATPase; TIGRFAM: ATPase, FliI/YscN family; KEGG: ccs:CCNA_03135 flagellum-specific ATP synthase FliL; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein. | 0.989 |
| Cseg_1369 | fliE | Cseg_1369 | Cseg_3339 | Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | KEGG: ccs:CCNA_01006 flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE. | 0.994 |
| Cseg_1433 | Cseg_2687 | Cseg_1433 | Cseg_2687 | Peptidase M23; KEGG: ccs:CCNA_02075 peptidoglycan-specific endopeptidase, M23 family; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM. | PFAM: Lytic transglycosylase catalytic; KEGG: ccs:CCNA_01252 soluble lytic murein transglycosylase. | 0.667 |
| Cseg_1665 | Cseg_2687 | Cseg_1665 | Cseg_2687 | PFAM: SmpA/OmlA domain protein; KEGG: ccs:CCNA_01427 lipoprotein, SmpA/OmlA family. | PFAM: Lytic transglycosylase catalytic; KEGG: ccs:CCNA_01252 soluble lytic murein transglycosylase. | 0.565 |
| Cseg_1665 | Cseg_2710 | Cseg_1665 | Cseg_2710 | PFAM: SmpA/OmlA domain protein; KEGG: ccs:CCNA_01427 lipoprotein, SmpA/OmlA family. | PFAM: protein of unknown function DUF1239; KEGG: ccs:CCNA_01226 hypothetical protein. | 0.585 |
| Cseg_2687 | Cseg_0418 | Cseg_2687 | Cseg_0418 | PFAM: Lytic transglycosylase catalytic; KEGG: ccs:CCNA_01252 soluble lytic murein transglycosylase. | Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.585 |
| Cseg_2687 | Cseg_0963 | Cseg_2687 | Cseg_0963 | PFAM: Lytic transglycosylase catalytic; KEGG: ccs:CCNA_01252 soluble lytic murein transglycosylase. | PFAM: protein of unknown function DUF1078 domain protein; KEGG: ccs:CCNA_02931 FlgE-related flagellar hook protein. | 0.528 |
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