STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_2836PFAM: short-chain dehydrogenase/reductase SDR; KEGG: jan:Jann_1321 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)    
Predicted Functional Partners:
Cseg_1724
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: amr:AM1_6141 3-oxoacyl-(acyl carrier protein) reductase, putative.
  
 
   0.727
Cseg_3054
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ace:Acel_1040 short-chain dehydrogenase/reductase SDR.
  
 
   0.723
Cseg_2837
KEGG: ccr:CC_2186 hypothetical protein.
       0.565
Cseg_0314
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_03491 3-oxoacyl-(acyl-carrier protein) reductase.
  
 
   0.497
Cseg_0579
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ccs:CCNA_00422 3-oxoacyl-(acyl-carrier protein) reductase.
  
 
   0.477
Cseg_3397
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cak:Caul_3460 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.465
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.