STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
coq7Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. (186 aa)    
Predicted Functional Partners:
ubiG
Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
  
 0.957
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
  
 
 0.925
Cseg_0625
KEGG: ccs:CCNA_03405 hypothetical protein; TIGRFAM: rpsU-divergently transcribed protein; PFAM: COQ9 domain protein.
  
 
 0.869
Cseg_2846
KEGG: ccs:CCNA_02279 disulfide bond formation protein B.
       0.822
Cseg_2845
PFAM: SNARE associated Golgi protein; KEGG: ccs:CCNA_02278 putative membrane-associated alkaline phosphatase.
       0.814
Cseg_2675
PFAM: cytochrome c class I; KEGG: ccs:CCNA_01268 cytochrome c.
  
 
 
 0.615
Cseg_3428
PFAM: cytochrome c class I; KEGG: ccs:CCNA_03030 cytochrome c.
  
 
 
 0.600
Cseg_2848
PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: ccs:CCNA_02281 membrane alanine aminopeptidase.
       0.567
Cseg_1976
PFAM: cyclase/dehydrase; KEGG: ccs:CCNA_01810 cytosolic protein.
  
 
 
 0.538
Cseg_2109
PFAM: cytochrome c class I; KEGG: cak:Caul_4608 cytochrome c class I.
  
 
 
 0.538
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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