STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_2923PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: ccs:CCNA_02353 membrane-bound aldehyde dehydrogenase iron-sulfur protein. (154 aa)    
Predicted Functional Partners:
Cseg_2922
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: ccs:CCNA_02352 membrane-bound aldehyde dehydrogenase, large subunit.
 
 0.988
Cseg_2088
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: vap:Vapar_5488 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
 0.976
Cseg_0049
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: ccs:CCNA_00021 putative aerobic-type carbon monoxide dehydrogenase, large subunit CoxL.
 
 0.951
Cseg_1807
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: cak:Caul_3605 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
 0.934
Cseg_1077
TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; KEGG: ccs:CCNA_02701 xanthine dehydrogenase large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead.
 
     0.927
Cseg_4062
PFAM: protein of unknown function DUF182; KEGG: ccs:CCNA_03692 xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
  
 0.812
Cseg_0051
KEGG: ccs:CCNA_00019 molybdopterin-guanine dinucleotide biosynthesis protein A.
 
  
 0.806
Cseg_2087
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: vap:Vapar_5489 molybdopterin dehydrogenase FAD-binding.
  
 
 0.793
Cseg_1078
KEGG: ccs:CCNA_02700 XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase); TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182.
 
  
 0.644
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
       0.615
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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