STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_3190PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rce:RC1_0326 TonB dependent receptor, putative. (796 aa)    
Predicted Functional Partners:
Cseg_0915
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_1672 TonB-dependent receptor.
  
    0.726
Cseg_2258
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_02048 TonB-dependent receptor.
  
    0.719
Cseg_1820
PFAM: TonB-dependent receptor plug; Secretin/TonB short domain; TonB-dependent receptor; KEGG: cak:Caul_4077 cyclic nucleotide-binding protein.
  
    0.698
Cseg_2032
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_2663 TonB-dependent receptor.
  
    0.688
Cseg_2381
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_0308 TonB-dependent receptor.
  
   
 0.687
Cseg_2443
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_1901 TonB-dependent receptor.
  
    0.673
Cseg_3288
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nar:Saro_3668 TonB-dependent receptor.
  
    0.665
Cseg_0481
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: cak:Caul_2646 TonB-dependent receptor plug.
  
    0.664
Cseg_1750
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: swi:Swit_1573 TonB-dependent receptor.
  
    0.664
Cseg_2367
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cak:Caul_1136 TonB-dependent receptor.
  
    0.662
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.