Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cseg_3209PFAM: TPR repeat-containing protein; KEGG: cak:Caul_2992 sulfotransferase. (638 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
    0.896
Cseg_3210
PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: cak:Caul_2993 hypothetical protein.
 
    0.834
Cseg_3208
PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: cak:Caul_2991 aspartyl/asparaginyl beta-hydroxylase.
 
     0.820
Cseg_3211
KEGG: cak:Caul_2994 hypothetical protein.
 
     0.820
phnX
Phosphonoacetaldehyde hydrolase; Involved in phosphonate degradation; Belongs to the HAD-like hydrolase superfamily. PhnX family.
       0.775
Cseg_3207
KEGG: cak:Caul_2990 FAD dependent oxidoreductase; TIGRFAM: FAD dependent oxidoreductase TIGR03364; PFAM: FAD dependent oxidoreductase.
       0.773
Cseg_1228
Transcriptional regulator, CadC; KEGG: pzu:PHZ_c1091 putative transcriptional regulator; manually curated; PFAM: transcriptional regulator domain protein.
 
 
 
 0.729
Cseg_3212
KEGG: cak:Caul_2995 TonB-dependent receptor; TIGRFAM: TonB-dependent receptor; outer membrane insertion C-terminal signal; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
 
     0.655
Cseg_0826
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: ccs:CCNA_03227 TonB-dependent receptor.
  
     0.640
Cseg_0247
PFAM: Peptidase M23; KEGG: ccs:CCNA_03547 peptidoglycan-specific endopeptidase, M23 family.
   
   0.585
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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