STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_3514TIGRFAM: cobalt chelatase, pCobS small subunit; KEGG: ccs:CCNA_03115 cobaltochelatase CobS subunit; PFAM: ATPase associated with various cellular activities AAA_5. (336 aa)    
Predicted Functional Partners:
Cseg_3700
Cobalt chelatase, pCobT subunit; SMART: von Willebrand factor type A; TIGRFAM: cobalt chelatase, pCobT subunit; KEGG: ccs:CCNA_00708 cobaltochelatase CobT subunit; PFAM: Cobalt chelatase CobT subunit.
 
 
 0.982
Cseg_1584
cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
     
  0.900
Cseg_3661
KEGG: ccs:CCNA_00766 cobalamin adenosyltransferase family protein; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
     
  0.900
Cseg_3031
KEGG: pzu:PHZ_c0619 nitric oxide reductase, subunit B.
  
  
 0.714
Cseg_3509
KEGG: ccs:CCNA_03105 molecular chaperones (DnaJ family); PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein.
 
     0.653
atpF
H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.601
atpF-2
H+transporting two-sector ATPase B/B' subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.574
Cseg_3513
KEGG: cak:Caul_0712 putative secreted protein.
       0.563
Cseg_2674
PFAM: GcrA cell cycle regulator; KEGG: ccs:CCNA_01269 hypothetical protein.
  
     0.553
Cseg_3515
KEGG: cak:Caul_0709 hypothetical protein.
       0.542
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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