STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_3576KEGG: ccs:CCNA_00831 alpha-glucosidase; PFAM: glycoside hydrolase family 31; PA14 domain protein; SMART: PA14 domain protein; Belongs to the glycosyl hydrolase 31 family. (946 aa)    
Predicted Functional Partners:
Cseg_3275
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: cak:Caul_4083 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.765
Cseg_1825
Beta-galactosidase; KEGG: cak:Caul_4083 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.763
Cseg_3644
PFAM: glycoside hydrolase family 9; KEGG: aca:ACP_2738 hypothetical protein.
 
     0.686
Cseg_1824
PFAM: Glycoside hydrolase 97; KEGG: ccs:CCNA_00838 alpha-glucosidase.
  
     0.663
Cseg_2013
Xylan 1,4-beta-xylosidase; KEGG: cak:Caul_2413 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.624
Cseg_1839
KEGG: ote:Oter_1363 hypothetical protein.
 
   
 0.622
Cseg_1837
KEGG: ccs:CCNA_00837 alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); SMART: glycoside hydrolase family 29 (alpha-L-fucosidase).
 
   
 0.603
Cseg_1899
alpha-L-arabinofuranosidase domain protein; KEGG: ccs:CCNA_01489 alpha-L-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; SMART: alpha-L-arabinofuranosidase domain protein.
 
   
 0.599
Cseg_2015
Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: cak:Caul_2415 alpha-N-arabinofuranosidase; SMART: alpha-L-arabinofuranosidase domain protein.
 
   
 0.589
Cseg_0977
Xylan 1,4-beta-xylosidase; KEGG: ccs:CCNA_02893 beta-xylosidase/alpha-L-arabinofuranosidase; PFAM: glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.568
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.