STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_3739KEGG: ccs:CCNA_00456 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core. (757 aa)    
Predicted Functional Partners:
Cseg_3737
KEGG: cak:Caul_0295 PTS system, N-acetylglucosamine-specific IIBC subunit; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site.
 
  
 0.997
Cseg_3140
KEGG: cak:Caul_0295 PTS system, N-acetylglucosamine-specific IIBC subunit; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site.
 
  
 0.990
Cseg_3738
KEGG: ccs:CCNA_00457 phosphoenolpyruvate-protein phosphotransferase/phosphocarrier protein HPr/PTS system, glucose-specific IIA subunit; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, glucose subfamily, IIA subunit; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; sugar-specific permease EIIA 1 domain; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region.
  
  
 0.941
Cseg_1422
Beta-N-acetylhexosaminidase; KEGG: ccs:CCNA_02085 anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase; PFAM: glycoside hydrolase family 3 domain protein.
    
 0.912
Cseg_0150
PFAM: aminoglycoside phosphotransferase; KEGG: ccs:CCNA_03649 Ser/Thr kinase-related phosphotransferase.
     
  0.900
Cseg_3141
KEGG: ccs:CCNA_00571 phosphoenolpyruvate-protein phosphotransferase/phosphocarrier protein HPr/PTS system, glucose-specific IIA subunit; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, glucose subfamily, IIA subunit; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; sugar-specific permease EIIA 1 domain; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region.
  
  
 0.807
hutH
TIGRFAM: histidine ammonia-lyase; KEGG: ccs:CCNA_01010 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase.
   
    0.688
Cseg_0645
KEGG: cak:Caul_4715 alpha-1,2-mannosidase; TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92.
 
   
 0.665
Cseg_3808
KEGG: cak:Caul_0228 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; glycoside hydrolase family 18; glycosyl transferase family 2; SMART: chitinase II.
 
   
 0.653
Cseg_3145
Alpha-1,2-mannosidase; KEGG: ccs:CCNA_00567 hypothetical protein; TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92.
 
   
 0.645
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.