STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_3847PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ccs:CCNA_00311 microcin-processing peptidase 1 (PmbA). (443 aa)    
Predicted Functional Partners:
Cseg_0279
PFAM: peptidase U62 modulator of DNA gyrase; KEGG: ccs:CCNA_03522 microcin-processing peptidase 2 (TldD).
 
 
0.856
Cseg_3848
PFAM: inositol monophosphatase; KEGG: ccs:CCNA_00310 myo-inositol-1(or 4)-monophosphatase.
       0.826
Cseg_3849
KEGG: ccs:CCNA_00309 cytosolic protein.
       0.749
Cseg_3846
KEGG: ccs:CCNA_00312 hypothetical protein.
 
     0.617
Cseg_3843
UbiD family decarboxylase; KEGG: ccs:CCNA_00315 3-polyprenyl-4-hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; Belongs to the UbiD family.
 
     0.421
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.