STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_3869PFAM: phosphate-selective porin O and P; KEGG: cak:Caul_4553 phosphate-selective porin O and P. (487 aa)    
Predicted Functional Partners:
Cseg_3870
KEGG: cak:Caul_4554 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1.
 
     0.627
Cseg_2717
KEGG: ccs:CCNA_01219 cytosolic protein.
  
     0.517
Cseg_2712
PFAM: polysaccharide biosynthesis protein; KEGG: ccs:CCNA_01224 O-antigen and teichoic acid membrane transport protein.
  
     0.472
Cseg_2722
PFAM: histidine triad (HIT) protein; KEGG: ccs:CCNA_01215 histidine triad (HIT) protein.
  
     0.457
Cseg_2718
PFAM: diacylglycerol kinase catalytic region; KEGG: ccs:CCNA_01218 sphingosine kinase/diacylglycerol kinase-related protein.
  
     0.444
Cseg_2726
KEGG: ccs:CCNA_01211 hypothetical protein.
  
     0.438
Cseg_2715
PFAM: phosphopantetheine-binding; KEGG: ccs:CCNA_01221 acyl carrier protein.
  
     0.426
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.