STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_3973PFAM: Tellurite resistance TerB; KEGG: ccs:CCNA_00755 tellurium resistance protein TerB. (158 aa)    
Predicted Functional Partners:
Cseg_3972
KEGG: ccs:CCNA_00756 hypothetical protein.
       0.785
Cseg_3974
PFAM: protein of unknown function DUF125 transmembrane; KEGG: ccs:CCNA_00754 hypothetical protein.
       0.552
Cseg_3971
PFAM: tRNA synthetase class II (D K and N); KEGG: ccs:CCNA_00757 lysyl-tRNA synthetase.
       0.438
Cseg_0326
PFAM: Resolvase domain; KEGG: ccs:CCNA_03481 DNA integration/recombination/inversion protein.
  
     0.430
Cseg_3157
PFAM: Protein of unknown function DUF2170; KEGG: ccs:CCNA_02448 hypothetical protein.
  
    0.419
Cseg_1344
PFAM: alpha/beta hydrolase fold; KEGG: ccs:CCNA_02165 esterase/lipase.
  
     0.404
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.