STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_3984Glucokinase; KEGG: cak:Caul_4974 glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family. (320 aa)    
Predicted Functional Partners:
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 0.930
glk
TIGRFAM: glucokinase; KEGG: ccs:CCNA_02133 glucokinase; PFAM: Glucokinase; Belongs to the bacterial glucokinase family.
  
  
 
0.927
pgi
KEGG: ccs:CCNA_00222 glucose-6-phosphate isomerase/glucose-6 phosphate 1-epimerase; PFAM: phosphoglucose isomerase (PGI); Belongs to the GPI family.
    
 0.921
Cseg_0080
KEGG: ccs:CCNA_00083 phosphoglucomutase/phosphomannomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase.
    
 0.914
Cseg_2915
Phosphomannomutase; KEGG: ccs:CCNA_02347 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase.
     
 0.914
Cseg_1895
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
    
 0.907
Cseg_0599
PFAM: Aldose 1-epimerase; KEGG: ccs:CCNA_03432 aldose 1-epimerase.
    
 0.906
Cseg_1825
Beta-galactosidase; KEGG: cak:Caul_4083 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; Belongs to the glycosyl hydrolase 2 family.
     
 0.904
Cseg_3275
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: cak:Caul_4083 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 2 family.
     
 0.904
Cseg_1555
PFAM: KDPG and KHG aldolase; KEGG: ccs:CCNA_01562 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase.
  
 
 0.890
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.