STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_4023PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pde:Pden_4519 activator of HSP90 ATPase 1 family protein. (149 aa)    
Predicted Functional Partners:
Cseg_4024
Putative transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; KEGG: pde:Pden_4518 regulatory protein, ArsR.
 
    0.904
Cseg_4022
PFAM: protein of unknown function DUF350; KEGG: ccs:CCNA_00134 surface protein.
       0.548
Cseg_4021
KEGG: ccs:CCNA_00135 endopeptidase DegP.
       0.515
Cseg_2259
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: ccs:CCNA_02049 ABM superfamily monooxygenase protein.
  
     0.500
Cseg_3640
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ccs:CCNA_03173 cytosolic protein.
  
     0.438
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.