STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cseg_4204PFAM: protein of unknown function DUF140; KEGG: cak:Caul_1329 hypothetical protein. (269 aa)    
Predicted Functional Partners:
Cseg_4205
KEGG: cak:Caul_1328 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.998
Cseg_4203
PFAM: Mammalian cell entry related domain protein; KEGG: cak:Caul_1330 hypothetical protein.
 
 0.997
Cseg_2990
KEGG: cak:Caul_1578 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.991
Cseg_2992
PFAM: Mammalian cell entry related domain protein; KEGG: cak:Caul_1576 hypothetical protein.
 
 0.988
Cseg_3098
KEGG: ccs:CCNA_02404 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 0.980
Cseg_4202
PFAM: toluene tolerance family protein; KEGG: ccs:CCNA_03807 organic solvent resistance transport system Ttg2D protein.
 
 
 0.972
Cseg_3099
PFAM: Mammalian cell entry related domain protein; KEGG: ccs:CCNA_02405 ABC membrane transporter, periplasmic component.
  
 0.946
Cseg_2993
PFAM: toluene tolerance family protein; KEGG: ccs:CCNA_03807 organic solvent resistance transport system Ttg2D protein.
 
 
 0.932
Cseg_3097
PFAM: protein of unknown function DUF140; KEGG: ccs:CCNA_02403 ABC transporter permease protein.
  
  
 
0.919
Cseg_2991
PFAM: protein of unknown function DUF140; KEGG: cak:Caul_1577 hypothetical protein.
  
  
 
0.901
Your Current Organism:
Caulobacter segnis
NCBI taxonomy Id: 509190
Other names: C. segnis ATCC 21756, Caulobacter segnis ATCC 21756, Caulobacter segnis DSM 7131, Caulobacter segnis IFO 13240, Caulobacter segnis str. ATCC 21756, Caulobacter segnis strain ATCC 21756
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.