STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000179595_01016Unannotated protein. (76 aa)    
Predicted Functional Partners:
GCA_000179595_03066
Unannotated protein.
  
 0.999
GCA_000179595_00704
Unannotated protein.
  
 
 0.959
GCA_000179595_04387
Unannotated protein.
  
 
 0.882
GCA_000179595_05018
Unannotated protein.
  
 
 0.869
GCA_000179595_04433
Unannotated protein.
    
 0.865
GCA_000179595_02347
Unannotated protein.
    
 0.855
GCA_000179595_01155
Unannotated protein.
  
 
 0.834
GCA_000179595_04579
Unannotated protein.
  
 
 0.796
GCA_000179595_04816
Unannotated protein.
  
 
 0.779
GCA_000179595_01004
Unannotated protein.
  
 0.763
Your Current Organism:
Hungateiclostridium cellulolyticum
NCBI taxonomy Id: 509191
Other names: Acetivibrio cellulolyticus ATCC 33288, Acetivibrio cellulolyticus CD2, H. cellulolyticum CD2, Hungateiclostridium cellulolyticum CD2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.