STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000179595_02927Unannotated protein. (942 aa)    
Predicted Functional Partners:
GCA_000179595_02929
Unannotated protein.
 
 0.999
GCA_000179595_01477
Unannotated protein.
 
 
 0.989
GCA_000179595_00945
Unannotated protein.
 
 0.984
GCA_000179595_00287
Unannotated protein.
    
 0.919
GCA_000179595_04514
Unannotated protein.
 
  
 0.843
GCA_000179595_04515
Unannotated protein.
 
 
 0.834
GCA_000179595_04513
Unannotated protein.
   
 
 0.749
GCA_000179595_00569
Unannotated protein.
     
 0.719
GCA_000179595_03228
Unannotated protein.
    
 0.680
GCA_000179595_01160
Unannotated protein.
    
  0.674
Your Current Organism:
Hungateiclostridium cellulolyticum
NCBI taxonomy Id: 509191
Other names: Acetivibrio cellulolyticus ATCC 33288, Acetivibrio cellulolyticus CD2, H. cellulolyticum CD2, Hungateiclostridium cellulolyticum CD2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.