STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000179595_03213Unannotated protein. (142 aa)    
Predicted Functional Partners:
GCA_000179595_04122
Unannotated protein.
  
 
 0.934
GCA_000179595_02346
Unannotated protein.
  
 
 0.923
GCA_000179595_01752
Unannotated protein.
    
  0.921
GCA_000179595_01776
Unannotated protein.
    
  0.917
GCA_000179595_01027
Unannotated protein.
  
 
 0.903
GCA_000179595_01452
Unannotated protein.
  
 
 0.903
GCA_000179595_00964
Unannotated protein.
   
 
 0.899
GCA_000179595_00956
Unannotated protein.
   
 
 0.898
GCA_000179595_01762
Unannotated protein.
    
 
 0.896
GCA_000179595_01738
Unannotated protein.
   
 
 0.895
Your Current Organism:
Hungateiclostridium cellulolyticum
NCBI taxonomy Id: 509191
Other names: Acetivibrio cellulolyticus ATCC 33288, Acetivibrio cellulolyticus CD2, H. cellulolyticum CD2, Hungateiclostridium cellulolyticum CD2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.