STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000179595_04469Unannotated protein. (1112 aa)    
Predicted Functional Partners:
GCA_000179595_04470
Unannotated protein.
       0.773
GCA_000179595_01984
Unannotated protein.
  
     0.740
GCA_000179595_03898
Unannotated protein.
  
     0.516
GCA_000179595_02102
Unannotated protein.
  
 
  0.513
GCA_000179595_01059
Unannotated protein.
  
 
  0.491
GCA_000179595_00654
Unannotated protein.
  
     0.490
GCA_000179595_01242
Unannotated protein.
  
     0.452
GCA_000179595_02450
Unannotated protein.
  
  
  0.427
GCA_000179595_03602
Unannotated protein.
 
  
 0.418
GCA_000179595_01017
Unannotated protein.
 
     0.415
Your Current Organism:
Hungateiclostridium cellulolyticum
NCBI taxonomy Id: 509191
Other names: Acetivibrio cellulolyticus ATCC 33288, Acetivibrio cellulolyticus CD2, H. cellulolyticum CD2, Hungateiclostridium cellulolyticum CD2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.