STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000179595_04949Unannotated protein. (267 aa)    
Predicted Functional Partners:
GCA_000179595_04948
Unannotated protein.
  
    0.870
GCA_000179595_04947
Unannotated protein.
     
 0.749
GCA_000179595_04945
Unannotated protein.
 
    0.722
GCA_000179595_00958
Unannotated protein.
   
  
 0.676
GCA_000179595_04987
Unannotated protein.
  
  
 0.673
GCA_000179595_04607
Unannotated protein.
  
  
 0.556
GCA_000179595_00459
Unannotated protein.
     
 0.531
GCA_000179595_04624
Unannotated protein.
  
  
 0.519
GCA_000179595_03626
Unannotated protein.
     
 0.492
GCA_000179595_03806
Unannotated protein.
     
 0.492
Your Current Organism:
Hungateiclostridium cellulolyticum
NCBI taxonomy Id: 509191
Other names: Acetivibrio cellulolyticus ATCC 33288, Acetivibrio cellulolyticus CD2, H. cellulolyticum CD2, Hungateiclostridium cellulolyticum CD2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.