STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGL30561.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)    
Predicted Functional Partners:
KGL31304.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.970
KGL31834.1
Phosphoenolpyruvate phosphomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.927
KGL30562.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.887
KGL30970.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.845
KGL31158.1
2-hydroxy-6-oxohepta-2,4-dienoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.845
KGL30808.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.776
KGL30290.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.776
KGL30183.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.776
gabD
Succinate-semialdehyde dehydrogenase; Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.646
KGL31578.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.599
Your Current Organism:
Helicobacter trogontum
NCBI taxonomy Id: 50960
Other names: ATCC 700114, CCUG 49050, Flexispira taxon 6, H. trogontum, Helicobacter sp. ATCC 43966, Helicobacter sp. ATCC 43968, Helicobacter sp. ATCC 49310, LRB 8581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.