Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KGL31067.1Tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family. (71 aa)    
Predicted Functional Partners:
gabD
Succinate-semialdehyde dehydrogenase; Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.606
KGL31578.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.606
KGL31597.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.470
KGL30779.1
Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.437
KGL30261.1
Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.437
KGL30154.1
Para-aminobenzoate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.437
KGL31066.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.427
KGL30970.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.423
KGL31158.1
2-hydroxy-6-oxohepta-2,4-dienoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.423
Your Current Organism:
Helicobacter trogontum
NCBI taxonomy Id: 50960
Other names: ATCC 700114, CCUG 49050, Flexispira taxon 6, H. trogontum, Helicobacter sp. ATCC 43966, Helicobacter sp. ATCC 43968, Helicobacter sp. ATCC 49310, LRB 8581
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