Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KGL31200.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1425 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.823
petA
Ubiquinol cytochrome C oxidoreductase; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
   0.820
KGL31179.1
Donor-ubiquinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.808
KGL30981.1
Processing protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.801
KGL30513.1
Ubiquinol cytochrome c oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.800
KGL31175.1
NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.
  
 
   0.770
KGL30843.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
KGL31910.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
KGL30836.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
KGL30318.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
Your Current Organism:
Helicobacter trogontum
NCBI taxonomy Id: 50960
Other names: ATCC 700114, CCUG 49050, Flexispira taxon 6, H. trogontum, Helicobacter sp. ATCC 43966, Helicobacter sp. ATCC 43968, Helicobacter sp. ATCC 49310, LRB 8581
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