Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KGL31945.1 | KGL31946.1 | LS81_07060 | LS81_07065 | Flagellin B; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.668 |
KGL31945.1 | aroA | LS81_07060 | LS81_07070 | Flagellin B; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.614 |
KGL31946.1 | KGL31945.1 | LS81_07065 | LS81_07060 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellin B; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.668 |
KGL31946.1 | aroA | LS81_07065 | LS81_07070 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.762 |
KGL31946.1 | prmC | LS81_07065 | LS81_05415 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protoporphyrinogen oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.415 |
KGL31946.1 | rpoZ | LS81_07065 | LS81_05780 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.490 |
aroA | KGL31945.1 | LS81_07070 | LS81_07060 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Flagellin B; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.614 |
aroA | KGL31946.1 | LS81_07070 | LS81_07065 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.762 |
prmC | KGL31946.1 | LS81_05415 | LS81_07065 | Protoporphyrinogen oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.415 |
rpoZ | KGL31946.1 | LS81_05780 | LS81_07065 | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.490 |