STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETZ24769.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (250 aa)    
Predicted Functional Partners:
ETZ19519.1
ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.834
ETZ23660.1
3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
  0.813
ETZ19452.1
3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
  0.810
ETZ22624.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.797
ETZ23691.1
beta-ketoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
  0.773
lpxC
hydroxymyristoyl-ACP dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
  
 0.769
ETZ21966.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.762
ETZ24770.1
MFS transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.754
ETZ23692.1
hydroxymyristoyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.749
fabG
3-ketoacyl-ACP reductase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 
0.739
Your Current Organism:
Pedobacter sp. V48
NCBI taxonomy Id: 509635
Other names: P. sp. V48
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