STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETZ20578.1Peptidase M23; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (558 aa)    
Predicted Functional Partners:
ETZ20579.1
Thiol peroxidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.840
ETZ20577.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.772
ETZ20576.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.644
ETZ19745.1
Cyanophycin synthetase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the MurCDEF family.
    
 0.569
ETZ19629.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.495
ETZ21330.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.492
ETZ19521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.472
ETZ19269.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.453
ETZ24208.1
DoxX family protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.435
ETZ21028.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.424
Your Current Organism:
Pedobacter sp. V48
NCBI taxonomy Id: 509635
Other names: P. sp. V48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.