STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETZ23620.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (509 aa)    
Predicted Functional Partners:
ETZ21966.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.819
ETZ23864.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.677
ETZ24308.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.651
ETZ21652.1
Bifunctional NAD(P)H-nitrite reductase/anaerobic dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
  0.649
ETZ20883.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.610
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.603
guaB
Inosine 5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.599
ETZ22656.1
Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.590
ETZ22624.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.586
ETZ22890.1
Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the CinA family.
  
 
  0.583
Your Current Organism:
Pedobacter sp. V48
NCBI taxonomy Id: 509635
Other names: P. sp. V48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.