STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETZ21521.1Organic solvent ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (276 aa)    
Predicted Functional Partners:
ETZ21520.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.999
ETZ21522.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.999
ETZ23954.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.995
ETZ22886.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.985
ETZ22884.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.946
ETZ23953.1
Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 
0.876
ETZ21946.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.598
ETZ21986.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
0.529
ETZ21966.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.418
ETZ24599.1
Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
      0.417
Your Current Organism:
Pedobacter sp. V48
NCBI taxonomy Id: 509635
Other names: P. sp. V48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.