STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP7Ribosomal RNA-processing protein 7. (302 aa)    
Predicted Functional Partners:
MPDQ_001250
U3 small nucleolar RNA-associated protein 22.
   
 0.999
UTP7
Small subunit (SSU) processome component.
   
 0.998
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.997
BMS1
Glycoside hydrolase 2 (Mannanase, beta-galactosidase).
   
 0.997
MPDQ_007166
WD_REPEATS_REGION domain-containing protein.
   
 0.997
MPDQ_003872
WD_REPEATS_REGION domain-containing protein.
   
 0.996
MPDQ_003789
Uncharacterized protein.
   
 0.996
MPDQ_001298
WD_REPEATS_REGION domain-containing protein.
   
 0.996
RRP9
Pre-rRNA processing protein.
   
 0.996
UTP13
U3 small nucleolar RNA-associated protein 13.
   
 0.996
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.