STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAP1Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (575 aa)    
Predicted Functional Partners:
MPDQ_003890
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.996
FIP1
Cleavage polyadenylation factor subunit fip1.
   
 0.996
CPSF4
Cleavage and polyadenylation specificity factor subunit 4.
    
 0.996
CFT1
mRNA cleavage and polyadenylation factor subunit.
    
 0.991
MPDQ_001051
DUF3453 domain-containing protein.
    
 0.989
YSH1
Endoribonuclease ysh1.
   
 0.988
PFS2_1
Pre-mRNA cleavage and polyadenylation factor (CPF) complex subunit.
   
 0.986
RNA14
mRNA 3'-end-processing protein rna14.
    
 0.982
MPDQ_003673
RRM domain-containing protein.
    
 0.981
SGN1
Cytoplasmic RNA-binding protein.
   
 0.972
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.