STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPDQ_003365TMF_TATA_bd domain-containing protein. (885 aa)    
Predicted Functional Partners:
RAB6A
Ras-protein Rab-6A.
    
 0.828
MPDQ_008196
Uncharacterized protein.
     
 0.701
VPS54
Vacuolar protein sorting-associated protein 54.
   
 
 0.701
COG3
Golgi transport complex subunit 3.
   
 
  0.697
MPDQ_003002
Uncharacterized protein.
     
 0.692
MPDQ_001008
Uncharacterized protein.
     
 0.690
MPDQ_007169
Cog4 domain-containing protein.
     
 0.685
VPS53
Vacuolar protein sorting-associated protein 53.
     
 0.685
MPDQ_001673
Uncharacterized protein.
     
 0.684
ARL3
ADP-ribosylation factor protein 3.
     
 0.669
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.