STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL1260S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)    
Predicted Functional Partners:
RPL3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
 
 0.993
MPDQ_004725
Uncharacterized protein.
   
 0.992
RPL7
60S ribosomal protein L7.
  
 0.992
RPL17
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.992
MPDQ_001874
KOW domain-containing protein.
  
 0.992
RPL2A
60S ribosomal protein L2A.
  
 0.992
RPL35
60S ribosomal protein L35.
  
 0.992
RPL30
60S ribosomal protein L30.
   
 0.992
RPL5
60S ribosomal protein L5.
  
 0.992
RPL8B
60S ribosomal protein L8B.
  
 0.992
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.