Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HAT2 | MPDQ_002934 | A0A507QN10 | A0A507QM01 | Histone acetyltransferase type B subunit 2. | Uncharacterized protein. | 0.732 |
HAT2 | MPDQ_004022 | A0A507QN10 | A0A507QLM9 | Histone acetyltransferase type B subunit 2. | Uncharacterized protein. | 0.951 |
HAT2 | MPDQ_004123 | A0A507QN10 | A0A507R2I3 | Histone acetyltransferase type B subunit 2. | Uncharacterized protein. | 0.685 |
MPDQ_002934 | HAT2 | A0A507QM01 | A0A507QN10 | Uncharacterized protein. | Histone acetyltransferase type B subunit 2. | 0.732 |
MPDQ_002934 | MPDQ_004022 | A0A507QM01 | A0A507QLM9 | Uncharacterized protein. | Uncharacterized protein. | 0.629 |
MPDQ_002934 | MPDQ_004123 | A0A507QM01 | A0A507R2I3 | Uncharacterized protein. | Uncharacterized protein. | 0.758 |
MPDQ_002934 | MPDQ_004624 | A0A507QM01 | A0A507R6C7 | Uncharacterized protein. | ERCC4 domain-containing protein. | 0.699 |
MPDQ_002934 | MPH1 | A0A507QM01 | A0A507QZC4 | Uncharacterized protein. | 3'-5' DNA helicase. | 0.674 |
MPDQ_002934 | NPL4 | A0A507QM01 | A0A507R1C5 | Uncharacterized protein. | Nuclear protein localization protein 4. | 0.650 |
MPDQ_002934 | NUT2 | A0A507QM01 | A0A507QXF8 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.628 |
MPDQ_002934 | RFA1 | A0A507QM01 | A0A507QZP4 | Uncharacterized protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.733 |
MPDQ_002934 | RFA2 | A0A507QM01 | A0A507QML6 | Uncharacterized protein. | Replication factor A protein 2. | 0.777 |
MPDQ_002934 | RGR1 | A0A507QM01 | A0A507R357 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.635 |
MPDQ_004022 | HAT2 | A0A507QLM9 | A0A507QN10 | Uncharacterized protein. | Histone acetyltransferase type B subunit 2. | 0.951 |
MPDQ_004022 | MPDQ_002934 | A0A507QLM9 | A0A507QM01 | Uncharacterized protein. | Uncharacterized protein. | 0.629 |
MPDQ_004123 | HAT2 | A0A507R2I3 | A0A507QN10 | Uncharacterized protein. | Histone acetyltransferase type B subunit 2. | 0.685 |
MPDQ_004123 | MPDQ_002934 | A0A507R2I3 | A0A507QM01 | Uncharacterized protein. | Uncharacterized protein. | 0.758 |
MPDQ_004123 | RFA2 | A0A507R2I3 | A0A507QML6 | Uncharacterized protein. | Replication factor A protein 2. | 0.484 |
MPDQ_004624 | MPDQ_002934 | A0A507R6C7 | A0A507QM01 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.699 |
MPDQ_004624 | MPH1 | A0A507R6C7 | A0A507QZC4 | ERCC4 domain-containing protein. | 3'-5' DNA helicase. | 0.899 |
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