Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARP4 | ARP5 | A0A507R2Y0 | A0A507QXB6 | NuA4 histone acetyltransferase subunit; Belongs to the actin family. | Nuclear actin-protein involved in chromatin remodeling; Belongs to the actin family. | 0.973 |
ARP4 | INO80C | A0A507R2Y0 | A0A507QV63 | NuA4 histone acetyltransferase subunit; Belongs to the actin family. | INO80 complex subunit C. | 0.962 |
ARP4 | MPDQ_002052 | A0A507R2Y0 | A0A507R0R5 | NuA4 histone acetyltransferase subunit; Belongs to the actin family. | Uncharacterized protein. | 0.474 |
ARP4 | MPDQ_002407 | A0A507R2Y0 | A0A507QMI6 | NuA4 histone acetyltransferase subunit; Belongs to the actin family. | Uncharacterized protein. | 0.798 |
ARP4 | RVB1 | A0A507R2Y0 | A0A507QQP2 | NuA4 histone acetyltransferase subunit; Belongs to the actin family. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.989 |
ARP5 | ARP4 | A0A507QXB6 | A0A507R2Y0 | Nuclear actin-protein involved in chromatin remodeling; Belongs to the actin family. | NuA4 histone acetyltransferase subunit; Belongs to the actin family. | 0.973 |
ARP5 | INO80C | A0A507QXB6 | A0A507QV63 | Nuclear actin-protein involved in chromatin remodeling; Belongs to the actin family. | INO80 complex subunit C. | 0.997 |
ARP5 | MPDQ_002407 | A0A507QXB6 | A0A507QMI6 | Nuclear actin-protein involved in chromatin remodeling; Belongs to the actin family. | Uncharacterized protein. | 0.785 |
ARP5 | RVB1 | A0A507QXB6 | A0A507QQP2 | Nuclear actin-protein involved in chromatin remodeling; Belongs to the actin family. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.996 |
INO80C | ARP4 | A0A507QV63 | A0A507R2Y0 | INO80 complex subunit C. | NuA4 histone acetyltransferase subunit; Belongs to the actin family. | 0.962 |
INO80C | ARP5 | A0A507QV63 | A0A507QXB6 | INO80 complex subunit C. | Nuclear actin-protein involved in chromatin remodeling; Belongs to the actin family. | 0.997 |
INO80C | MPDQ_002407 | A0A507QV63 | A0A507QMI6 | INO80 complex subunit C. | Uncharacterized protein. | 0.751 |
INO80C | RAD18 | A0A507QV63 | A0A507R2S6 | INO80 complex subunit C. | E3 ubiquitin-protein ligase rad18. | 0.424 |
INO80C | RVB1 | A0A507QV63 | A0A507QQP2 | INO80 complex subunit C. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.993 |
MMS2 | MPDQ_002407 | A0A507QXX1 | A0A507QMI6 | E2 ubiquitin-conjugating protein mms2. | Uncharacterized protein. | 0.767 |
MMS2 | MPDQ_003103 | A0A507QXX1 | A0A507R3N9 | E2 ubiquitin-conjugating protein mms2. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.884 |
MMS2 | MPDQ_004852 | A0A507QXX1 | A0A507R0P8 | E2 ubiquitin-conjugating protein mms2. | 3'-5' exonuclease domain-containing protein. | 0.665 |
MMS2 | RAD18 | A0A507QXX1 | A0A507R2S6 | E2 ubiquitin-conjugating protein mms2. | E3 ubiquitin-protein ligase rad18. | 0.835 |
MPDQ_002052 | ARP4 | A0A507R0R5 | A0A507R2Y0 | Uncharacterized protein. | NuA4 histone acetyltransferase subunit; Belongs to the actin family. | 0.474 |
MPDQ_002052 | MPDQ_002407 | A0A507R0R5 | A0A507QMI6 | Uncharacterized protein. | Uncharacterized protein. | 0.750 |
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