STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPDQ_003553G-patch domain-containing protein. (776 aa)    
Predicted Functional Partners:
PRP43
DEAH-box ATP-dependent RNA helicase prp43.
   
 0.994
CLF1
NineTeen Complex (NTC) component.
   
   0.977
MPDQ_000537
WD_REPEATS_REGION domain-containing protein.
   
 0.962
MPDQ_004119
Tr-type G domain-containing protein.
   
 
 0.947
PRP8
Pre-mRNA-splicing factor 8.
    
 
 0.934
SYF2
Pre-mRNA-splicing factor syf2.
    
  0.932
LEA1
U2 snRNP complex subunit.
    
 
 0.928
PRP16
DEAH-box RNA helicase prp16.
   
 0.923
PRP45
mRNA splicing protein.
    
 
 0.918
SYF1
Pre-mRNA-splicing factor syf1.
   
 
 0.918
Your Current Organism:
Monascus purpureus
NCBI taxonomy Id: 5098
Other names: ATCC 16361 [[Monascus araneosus]], ATCC 16365, ATCC 16367 [[Monascus rubiginosus]], ATCC 16426, CBS 109.07, CBS 284.34 [[Monascus araneosus]], CBS 288.34 [[Monascus rubiginosus]], CECT 2955, FRR 2190 [[Monascus araneosus]], IFO 4482 [[Monascus araneosus]], IFO 4484 [[Monascus rubiginosus]], IFO 4513, IMI 210765, M. purpureus, Monascus albidus, Monascus anka, Monascus araneosus, Monascus purpurea, Monascus rubiginosus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.