Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KIN28 | MPDQ_003411 | A0A507QGV5 | A0A507QMX0 | TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily. | HIT domain-containing protein. | 0.689 |
KIN28 | MPDQ_004720 | A0A507QGV5 | A0A507QLH8 | TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.999 |
KIN28 | RPB8 | A0A507QGV5 | A0A507R1W1 | TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.868 |
KIN28 | SPT15 | A0A507QGV5 | A0A507QTW2 | TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily. | TATA-box-binding protein. | 0.994 |
KIN28 | SSL2 | A0A507QGV5 | A0A507QUV4 | TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily. | DNA repair helicase RAD25. | 0.982 |
KIN28 | TFB3 | A0A507QGV5 | A0A507QR96 | TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily. | TFIIH/NER complex subunit. | 0.999 |
MPDQ_002064 | MPDQ_003411 | A0A507QQB9 | A0A507QMX0 | Uncharacterized protein. | HIT domain-containing protein. | 0.659 |
MPDQ_002064 | MPDQ_007960 | A0A507QQB9 | A0A507QR36 | Uncharacterized protein. | Uncharacterized protein. | 0.679 |
MPDQ_002064 | RPB8 | A0A507QQB9 | A0A507R1W1 | Uncharacterized protein. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.561 |
MPDQ_002064 | SPT15 | A0A507QQB9 | A0A507QTW2 | Uncharacterized protein. | TATA-box-binding protein. | 0.803 |
MPDQ_003411 | KIN28 | A0A507QMX0 | A0A507QGV5 | HIT domain-containing protein. | TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily. | 0.689 |
MPDQ_003411 | MPDQ_002064 | A0A507QMX0 | A0A507QQB9 | HIT domain-containing protein. | Uncharacterized protein. | 0.659 |
MPDQ_003411 | MPDQ_003840 | A0A507QMX0 | A0A507R228 | HIT domain-containing protein. | Uncharacterized protein. | 0.785 |
MPDQ_003411 | MPDQ_004720 | A0A507QMX0 | A0A507QLH8 | HIT domain-containing protein. | CYCLIN domain-containing protein; Belongs to the cyclin family. | 0.589 |
MPDQ_003411 | MPDQ_006922 | A0A507QMX0 | A0A507QVA3 | HIT domain-containing protein. | SprT-like domain-containing protein. | 0.659 |
MPDQ_003411 | MPDQ_007960 | A0A507QMX0 | A0A507QR36 | HIT domain-containing protein. | Uncharacterized protein. | 0.638 |
MPDQ_003411 | RPB8 | A0A507QMX0 | A0A507R1W1 | HIT domain-containing protein. | DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. | 0.599 |
MPDQ_003411 | SPT15 | A0A507QMX0 | A0A507QTW2 | HIT domain-containing protein. | TATA-box-binding protein. | 0.747 |
MPDQ_003411 | SSL2 | A0A507QMX0 | A0A507QUV4 | HIT domain-containing protein. | DNA repair helicase RAD25. | 0.586 |
MPDQ_003411 | TFB3 | A0A507QMX0 | A0A507QR96 | HIT domain-containing protein. | TFIIH/NER complex subunit. | 0.635 |
page 1 of 4