Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MPDQ_007702 | POLR2A | A0A507QTT1 | A0A507QLH1 | RPOL9 domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| MPDQ_007702 | POLR2F | A0A507QTT1 | A0A507QZG1 | RPOL9 domain-containing protein. | DNA-directed RNA polymerases I, II, and III subunit RPABC2. | 0.999 |
| MPDQ_007702 | RPB11 | A0A507QTT1 | A0A507QJW3 | RPOL9 domain-containing protein. | DNA-directed RNA polymerase II core subunit. | 0.999 |
| MPDQ_007702 | RPB2 | A0A507QTT1 | A0A507QVV6 | RPOL9 domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| MPDQ_007702 | RPB3 | A0A507QTT1 | A0A507QTH4 | RPOL9 domain-containing protein. | 45 kDa subunit of RNA polymerase II. | 0.999 |
| MPDQ_007702 | RPB4 | A0A507QTT1 | A0A507QP42 | RPOL9 domain-containing protein. | RNA polymerase B. | 0.999 |
| MPDQ_007702 | RPB5 | A0A507QTT1 | A0A507QNT5 | RPOL9 domain-containing protein. | DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5). | 0.999 |
| MPDQ_007702 | RPB7 | A0A507QTT1 | A0A507R1V2 | RPOL9 domain-containing protein. | DNA-directed RNA polymerase II subunit. | 0.999 |
| MPDQ_007702 | SPT4 | A0A507QTT1 | A0A507QPA2 | RPOL9 domain-containing protein. | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.990 |
| MPDQ_007702 | SPT5 | A0A507QTT1 | A0A507QXD7 | RPOL9 domain-containing protein. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.988 |
| POLR2A | MPDQ_007702 | A0A507QLH1 | A0A507QTT1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RPOL9 domain-containing protein. | 0.999 |
| POLR2A | POLR2F | A0A507QLH1 | A0A507QZG1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerases I, II, and III subunit RPABC2. | 0.999 |
| POLR2A | RPB11 | A0A507QLH1 | A0A507QJW3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase II core subunit. | 0.999 |
| POLR2A | RPB2 | A0A507QLH1 | A0A507QVV6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| POLR2A | RPB3 | A0A507QLH1 | A0A507QTH4 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 45 kDa subunit of RNA polymerase II. | 0.999 |
| POLR2A | RPB4 | A0A507QLH1 | A0A507QP42 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase B. | 0.999 |
| POLR2A | RPB5 | A0A507QLH1 | A0A507QNT5 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5). | 0.999 |
| POLR2A | RPB7 | A0A507QLH1 | A0A507R1V2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase II subunit. | 0.999 |
| POLR2A | SPT4 | A0A507QLH1 | A0A507QPA2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.996 |
| POLR2A | SPT5 | A0A507QLH1 | A0A507QXD7 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.996 |
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